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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1365.1
Min RPKM: 182.2
Std RPKM: 209.0
Median RPKM: 433.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1365.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1296.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
994.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
986.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
944.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
870.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
776.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
739.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
738.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
733.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
720.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
715.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
675.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
672.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
650.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
646.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
645.2
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
642.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
636.7
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
633.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
629.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
619.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
595.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
595.3
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
591.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
582.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
574.6
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
565.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
561.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
554.6
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
549.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
548.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
544.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
542.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
539.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
537.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
537.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
509.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
489.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
485.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
483.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
470.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
460.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
458.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
455.8
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
452.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
443.2
GTEX-QCQG-1426-SM-48U22
50-59 years, female
433.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
433.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
429.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
428.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
422.5
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
416.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
410.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
409.5
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
409.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
394.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
390.1
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
389.4
GTEX-S341-0726-SM-4AD5R
40-49 years, female
387.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
387.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
386.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
384.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
370.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
368.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
368.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
366.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
364.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
364.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
362.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
348.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
346.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
341.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
339.4
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
335.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
333.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
329.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
326.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
321.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
314.1
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
314.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
309.3
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
307.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
307.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
303.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
302.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
294.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
292.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
292.6
GTEX-11I78-1926-SM-59878
50-59 years, female
282.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
274.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
272.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
266.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
247.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
240.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
206.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
182.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.