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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2904.1
Min RPKM: 20.5
Std RPKM: 466.9
Median RPKM: 246.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
2904.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
2141.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
2048.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1748.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
1650.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1418.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
1307.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
1230.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1065.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
849.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
686.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
645.9
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
635.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
583.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
576.5
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
504.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
493.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
473.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
464.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
464.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
439.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
438.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
436.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
406.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
403.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
388.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
383.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
375.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
367.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
367.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
367.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
349.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
342.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
341.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
329.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
321.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
320.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
317.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
305.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
302.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
290.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
280.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
280.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
280.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
278.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
273.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
265.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
259.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
256.3
GTEX-13111-0126-SM-5EGHO
50-59 years, male
252.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
252.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
251.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
241.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
231.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
230.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
225.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
224.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
222.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
222.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
214.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
214.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
206.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
200.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
196.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
190.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
186.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
180.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
177.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
174.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
172.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
172.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
166.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
160.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
159.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
157.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
150.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
150.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
146.2
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
139.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
138.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
138.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
137.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
136.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
135.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
133.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
131.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
128.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
125.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
123.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
103.2
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
101.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
100.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
95.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
88.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
84.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
79.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
76.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
75.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
74.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
74.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
72.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
36.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
28.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
20.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.