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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 282.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 37.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 28.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 745.5
Min RPKM: 53.3
Std RPKM: 115.3
Median RPKM: 205.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
745.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
565.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
528.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
501.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
492.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
479.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
475.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
471.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
459.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
458.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
458.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
457.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
450.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
449.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
448.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
427.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
416.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
412.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
408.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
398.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
398.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
391.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
390.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
387.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
380.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
379.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
368.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
367.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
364.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
358.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
355.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
355.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
346.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
340.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
339.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
338.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
338.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
336.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
334.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
328.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
327.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
325.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
324.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
319.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
318.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
311.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
311.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
308.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
306.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
303.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
300.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
300.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
300.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
299.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
294.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
291.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
290.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
289.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
287.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
283.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
282.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
280.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
279.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
278.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
278.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
277.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
274.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
273.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
271.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
262.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
262.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
262.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
261.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
260.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
259.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
256.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
256.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
255.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
253.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
252.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
248.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
248.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
245.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
244.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
244.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
241.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
240.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
239.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
239.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
237.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
235.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
234.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
232.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
232.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
224.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
224.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
223.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
222.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
219.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
219.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
218.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
218.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
215.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
215.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
210.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
210.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
205.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
205.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
203.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
203.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
202.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
202.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
201.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
198.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
197.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
195.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
195.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
193.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
190.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
188.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
187.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
187.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
186.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
185.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
184.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
182.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
182.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
182.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
182.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
181.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
181.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
178.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
177.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
176.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
175.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
175.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
173.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
173.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
171.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
170.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
169.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
164.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
164.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
163.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
162.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
157.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
156.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
156.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
156.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
156.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
154.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
154.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
151.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
149.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
146.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
145.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
143.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
140.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
139.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
138.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
136.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
136.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
136.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
135.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
133.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
133.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
131.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
131.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
130.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
130.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
130.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
130.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
129.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
125.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
124.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
124.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
123.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
120.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
116.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
116.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
115.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
114.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
111.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
111.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
110.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
108.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
106.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
106.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
106.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
105.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
105.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
105.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
103.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
102.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
102.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
98.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
98.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
97.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
94.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
93.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
93.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
91.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
91.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
87.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
81.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
78.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
78.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
77.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
71.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
69.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
69.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
57.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
54.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
53.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.