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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 194.9
Min RPKM: 2.6
Std RPKM: 35.8
Median RPKM: 32.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
194.9
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
159.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
154.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
145.9
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
131.2
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
95.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
94.8
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
89.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
85.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
80.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
79.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
77.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
74.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
73.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
71.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
69.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
66.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
64.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
64.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
62.9
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
61.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
61.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
58.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
57.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
57.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
55.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
54.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
54.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
53.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
52.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
49.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
48.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
47.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
47.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
47.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
44.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
42.0
GTEX-QCQG-1226-SM-48U23
50-59 years, female
41.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
40.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
40.7
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
40.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
37.1
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
35.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
34.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
33.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
33.4
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
32.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
32.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
32.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
32.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
32.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
31.9
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
30.1
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
29.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
28.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
27.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
26.8
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
25.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
25.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
24.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
24.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
24.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
24.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
23.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
22.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
21.7
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
21.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
20.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
20.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
19.0
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
18.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
16.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
16.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
15.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
15.1
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
14.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
14.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
14.7
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
14.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
13.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
13.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
11.4
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
9.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
9.6
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
9.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
9.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
7.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
7.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
7.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
6.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
5.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
5.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
4.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
3.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
3.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
2.6
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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