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RAMP1
COLON - Expression summary
RNA expressioni
HPA:14.2TPM
GTEx:98.7RPKM
FANTOM5:72.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 14.2
overview Male, age 54 Sample 1
TPM: 26.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 47.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 98.7
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 156.6
Samples: 149

Max RPKM: 292.9
Min RPKM: 67.5
Std RPKM: 42.4
Median RPKM: 153.3
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 292.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 276.4
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 274.5
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 261.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 245.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 239.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 238.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 227.8
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 220.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 220.0
Show all
Colon - Transverse
RPKM: 54.6
Samples: 196

Max RPKM: 395.1
Min RPKM: 0.9
Std RPKM: 60.7
Median RPKM: 32.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 395.1
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 241.2
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 219.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 187.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 182.9
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 180.9
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 171.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 168.1
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 165.9
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 165.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 72.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 65.5
FF:10014-101C5 62,83,84 years, mixed 72.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.