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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 63.3
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 50.1
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 52.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 28.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 28.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 63.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 52.4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 59.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 174.2
Min RPKM: 5.7
Std RPKM: 33.9
Median RPKM: 36.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
174.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
153.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
133.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
133.6
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
128.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
127.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
125.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
120.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
113.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
105.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
99.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
98.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
96.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
94.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
81.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
81.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
78.6
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
76.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
70.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
69.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
68.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
68.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
68.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
66.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
66.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
66.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
65.6
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
65.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
63.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
63.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
62.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
60.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
60.4
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
60.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
58.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
57.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
55.9
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
53.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
53.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
50.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
50.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
49.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
48.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
48.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
48.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
48.0
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
47.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
47.2
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
46.8
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
46.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
45.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
43.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
43.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
40.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
39.5
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
39.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
38.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
37.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
37.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
36.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
36.0
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
35.8
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
35.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
35.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
35.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
34.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
32.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
31.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
31.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
30.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
30.6
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
30.5
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
30.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
30.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
30.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
29.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
28.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
28.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
27.9
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
27.3
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
27.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
26.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
26.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
26.2
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
25.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
25.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
24.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
23.2
GTEX-12696-0826-SM-5EGGE
60-69 years, male
22.6
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
22.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
22.3
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
21.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
20.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
20.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
19.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
19.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
19.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
18.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
18.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
17.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
17.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
14.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
14.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
14.0
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
13.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
13.5
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
13.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
13.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
13.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
12.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
12.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
9.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
9.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
9.7
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
9.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
9.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
9.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
8.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
5.7
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
