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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1135.1
Min RPKM: 99.2
Std RPKM: 291.4
Median RPKM: 677.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
1135.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1085.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
1084.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
1079.7
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
1076.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
1058.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
1051.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
1045.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
1002.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
994.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
990.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
976.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
971.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
971.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
970.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
970.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
964.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
959.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
959.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
944.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
939.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
933.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
931.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
929.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
926.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
926.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
924.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
920.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
920.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
919.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
913.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
910.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
891.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
888.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
886.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
881.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
861.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
860.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
857.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
845.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
835.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
830.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
829.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
822.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
803.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
785.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
782.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
781.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
775.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
755.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
754.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
736.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
735.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
731.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
726.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
722.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
708.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
679.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
677.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
660.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
637.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
636.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
612.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
610.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
609.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
595.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
588.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
579.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
571.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
570.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
566.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
563.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
561.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
556.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
534.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
525.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
521.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
505.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
494.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
480.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
473.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
472.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
460.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
458.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
409.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
405.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
386.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
386.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
383.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
379.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
367.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
357.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
336.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
319.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
313.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
296.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
291.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
282.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
259.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
248.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
242.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
241.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
234.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
225.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
222.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
221.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
197.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
190.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
190.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
168.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
167.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
167.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
161.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
141.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
129.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
114.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
99.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.