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COLON - Expression summary
RNA expressioni
HPA:20.1TPM
GTEx:13.1RPKM
FANTOM5:100.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 20.1
overview Male, age 54 Sample 1
TPM: 16.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 33.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 13.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 14.0
Samples: 149

Max RPKM: 39.5
Min RPKM: 6.0
Std RPKM: 5.0
Median RPKM: 12.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 39.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 31.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 31.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 30.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 25.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 25.1
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 24.6
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 22.5
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 22.2
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 20.5
Show all
Colon - Transverse
RPKM: 12.4
Samples: 196

Max RPKM: 43.2
Min RPKM: 6.2
Std RPKM: 4.9
Median RPKM: 10.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 43.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 37.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 31.7
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 26.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 26.1
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 25.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 22.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 22.9
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 22.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 22.4
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 100.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 81.6
FF:10014-101C5 62,83,84 years, mixed 100.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.