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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 619.1
Min RPKM: 250.9
Std RPKM: 75.4
Median RPKM: 410.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
619.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
584.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
572.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
560.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
551.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
549.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
540.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
539.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
520.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
520.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
519.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
518.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
511.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
511.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
509.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
502.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
501.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
497.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
496.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
494.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
492.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
489.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
485.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
484.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
475.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
472.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
472.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
472.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
471.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
461.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
460.3
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
458.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
456.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
455.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
449.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
448.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
448.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
448.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
448.4
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
446.9
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
441.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
436.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
436.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
436.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
427.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
422.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
420.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
419.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
414.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
414.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
412.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
412.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
408.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
405.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
397.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
395.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
393.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
391.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
391.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
391.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
389.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
389.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
388.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
387.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
386.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
386.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
385.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
382.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
380.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
376.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
375.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
369.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
365.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
363.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
363.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
361.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
359.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
356.5
GTEX-X585-1826-SM-4QAS3
50-59 years, male
354.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
350.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
350.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
348.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
348.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
347.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
346.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
342.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
341.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
340.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
340.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
339.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
337.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
335.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
333.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
332.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
328.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
324.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
320.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
319.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
317.4
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
311.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
306.0
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
295.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
262.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
250.9
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.