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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2470.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1870.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2498.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1459.6
Min RPKM: 217.7
Std RPKM: 136.7
Median RPKM: 373.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1459.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1102.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1016.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
838.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
820.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
699.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
684.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
667.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
633.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
630.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
618.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
597.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
589.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
583.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
573.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
565.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
563.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
559.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
558.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
545.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
544.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
533.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
532.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
532.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
528.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
528.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
522.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
506.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
499.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
497.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
495.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
491.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
489.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
484.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
476.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
475.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
474.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
473.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
470.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
464.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
464.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
459.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
457.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
457.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
456.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
454.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
453.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
450.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
447.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
447.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
442.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
442.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
437.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
437.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
434.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
432.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
427.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
426.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
425.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
424.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
424.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
424.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
422.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
420.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
420.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
417.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
417.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
416.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
416.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
415.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
415.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
415.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
415.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
414.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
414.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
413.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
412.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
411.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
410.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
410.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
408.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
408.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
407.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
407.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
404.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
404.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
403.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
403.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
400.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
397.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
397.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
396.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
396.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
393.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
390.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
388.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
387.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
386.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
386.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
385.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
385.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
383.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
381.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
379.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
379.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
375.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
374.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
372.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
370.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
369.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
369.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
368.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
368.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
365.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
362.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
362.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
361.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
361.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
360.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
360.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
360.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
359.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
359.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
359.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
359.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
358.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
358.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
358.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
358.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
357.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
357.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
356.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
355.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
355.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
354.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
354.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
354.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
353.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
353.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
351.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
351.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
350.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
349.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
348.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
346.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
345.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
345.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
344.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
343.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
342.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
341.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
341.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
341.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
341.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
340.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
340.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
340.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
339.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
338.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
338.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
337.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
336.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
335.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
335.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
332.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
331.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
329.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
329.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
328.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
328.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
328.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
325.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
325.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
324.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
322.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
321.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
320.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
319.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
318.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
318.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
317.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
314.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
313.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
312.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
310.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
307.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
303.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
301.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
298.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
295.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
295.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
295.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
294.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
292.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
292.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
291.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
289.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
289.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
283.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
278.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
278.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
276.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
275.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
274.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
267.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
264.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
263.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
262.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
258.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
254.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
246.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
234.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
233.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
217.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.