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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 75.4
Min RPKM: 15.5
Std RPKM: 10.5
Median RPKM: 38.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
75.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
73.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
69.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
68.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
64.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
57.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
56.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
56.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
55.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
55.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
54.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
52.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
52.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
52.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
48.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
48.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
48.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
47.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
47.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
47.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
46.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
46.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
46.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
45.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
45.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
44.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
44.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
44.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
44.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
43.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
43.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
42.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
42.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
42.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
42.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
42.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
41.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
41.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
41.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
41.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
41.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
41.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
41.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
41.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
40.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
40.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
40.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
40.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
40.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
40.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
39.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
39.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
39.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
39.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
38.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
38.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
38.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
38.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
38.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
38.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
38.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
37.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
37.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
37.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
36.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
36.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
36.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
36.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
36.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
35.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
35.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
35.6
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
35.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
34.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
34.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
34.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
33.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
33.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
33.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
33.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
33.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
33.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
33.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
33.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
32.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
32.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
32.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
32.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
32.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
32.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
31.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
31.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
31.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
31.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
30.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
30.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
30.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
30.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
30.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
29.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
28.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
28.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
28.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
28.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
27.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
27.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
26.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
26.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
26.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
25.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
25.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
25.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
23.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
22.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
21.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
18.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
15.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.