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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 187.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 371.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 98
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 143.3
Min RPKM: 14.4
Std RPKM: 22.6
Median RPKM: 53.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
143.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
128.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
127.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
118.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
110.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
107.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
104.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
104.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
103.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
102.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
101.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
97.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
96.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
94.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
92.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
92.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
91.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
89.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
88.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
87.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
87.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
86.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
85.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
84.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
83.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
82.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
82.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
81.6
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
81.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
81.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
81.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
80.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
80.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
80.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
80.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
79.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
79.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
78.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
77.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
77.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
76.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
76.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
76.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
74.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
74.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
73.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
72.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
72.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
70.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
70.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
70.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
69.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
68.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
67.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
67.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
67.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
67.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
67.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
66.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
66.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
65.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
65.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
65.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
65.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
65.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
64.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
64.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
64.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
63.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
62.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
62.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
62.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
62.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
61.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
61.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
60.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
60.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
60.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
60.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
60.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
60.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
59.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
59.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
59.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
58.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
58.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
58.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
57.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
57.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
57.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
57.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
57.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
57.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
57.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
56.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
56.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
56.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
56.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
56.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
56.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
55.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
55.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
55.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
54.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
54.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
54.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
54.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
53.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
53.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
53.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
53.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
53.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
52.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
52.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
52.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
52.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
52.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
51.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
51.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
51.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
51.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
50.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
50.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
49.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
49.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
49.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
48.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
48.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
48.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
48.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
47.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
47.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
46.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
46.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
46.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
46.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
45.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
45.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
45.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
45.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
45.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
45.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
44.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
43.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
43.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
43.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
42.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
42.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
42.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
42.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
41.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
40.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
40.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
40.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
40.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
40.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
40.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
39.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
39.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
38.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
38.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
38.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
37.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
37.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
37.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
37.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
36.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
36.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
36.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
36.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
36.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
35.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
35.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
35.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
35.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
35.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
35.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
34.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
33.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
33.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
33.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
33.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
33.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
33.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
31.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
31.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
31.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
31.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
31.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
31.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
31.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
31.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
31.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
30.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
30.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
29.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
29.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
29.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
28.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
27.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
27.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
27.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
27.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
27.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
26.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
25.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
24.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
24.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
24.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
22.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
22.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
22.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
19.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
14.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.