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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 7170.1
Min RPKM: 141.6
Std RPKM: 1122.9
Median RPKM: 1111.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
7170.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
6524.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
4556.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
3860.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3505.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
3121.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
3068.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
2737.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
2362.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
2347.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
2247.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2247.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
2129.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1962.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
1880.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1865.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1842.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1840.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1813.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1644.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
1630.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
1591.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1566.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1537.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1510.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1488.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
1419.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
1396.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1390.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1375.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1369.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
1358.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1339.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1331.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
1329.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
1327.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1304.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1277.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1224.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
1212.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1187.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1176.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1161.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1140.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1138.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1122.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
1112.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1110.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
1023.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
1018.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
986.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
978.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
975.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
964.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
959.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
927.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
905.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
881.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
880.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
878.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
876.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
875.7
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
872.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
866.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
862.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
856.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
845.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
844.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
819.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
806.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
793.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
760.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
760.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
737.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
695.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
668.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
649.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
644.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
638.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
635.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
629.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
621.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
595.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
486.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
472.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
357.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
345.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
337.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
316.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
315.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
296.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
269.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
213.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
141.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.