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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2744.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3745.1
Min RPKM: 71.1
Std RPKM: 709.8
Median RPKM: 547.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
3745.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
3642.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
3305.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
2693.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
2236.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
2177.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
1973.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
1929.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
1925.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
1860.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
1709.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
1679.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
1639.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
1617.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
1616.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
1610.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
1516.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
1511.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
1471.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
1456.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
1449.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
1363.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
1297.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
1296.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
1191.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
1158.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
1063.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
1019.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
987.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
943.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
901.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
839.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
796.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
780.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
776.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
775.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
758.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
751.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
712.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
678.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
672.9
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
656.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
652.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
642.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
622.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
621.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
619.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
612.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
611.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
585.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
578.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
575.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
567.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
567.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
566.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
554.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
553.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
542.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
532.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
532.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
525.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
501.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
498.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
494.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
489.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
481.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
471.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
462.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
428.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
422.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
405.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
397.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
397.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
394.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
393.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
386.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
382.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
380.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
377.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
364.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
355.0
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
353.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
352.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
350.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
327.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
327.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
326.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
325.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
312.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
310.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
309.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
308.0
GTEX-WL46-2926-SM-3LK82
50-59 years, male
305.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
302.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
301.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
298.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
289.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
288.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
277.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
263.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
262.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
235.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
225.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
196.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
191.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
190.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
187.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
186.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
167.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
143.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
129.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
118.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
113.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
71.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 630.0
Samples: 108
Max RPKM: 3245.7
Min RPKM: 92.8
Std RPKM: 594.9
Median RPKM: 416.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
3245.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
2663.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
2585.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
2053.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
1940.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
1937.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
1897.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
1830.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
1756.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
1562.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
1457.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
1441.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
1335.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
1331.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
1130.3
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
1098.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
1082.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
1059.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
1048.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
992.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
971.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
939.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
931.3
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
886.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
876.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
860.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
809.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
808.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
805.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
782.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
675.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
651.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
637.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
631.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
594.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
589.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
589.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
551.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
549.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
537.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
519.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
518.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
517.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
506.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
495.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
492.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
486.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
451.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
446.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
441.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
439.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
433.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
426.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
423.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
408.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
401.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
382.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
374.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
367.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
355.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
354.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
340.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
336.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
330.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
323.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
312.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
303.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
302.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
289.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
288.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
287.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
285.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
284.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
284.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
280.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
277.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
276.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
259.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
258.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
252.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
252.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
248.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
243.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
242.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
232.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
229.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
216.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
215.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
208.3
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
204.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
200.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
198.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
196.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
185.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
181.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
181.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
179.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
166.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
161.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
161.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
156.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
149.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
139.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
127.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
123.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
102.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
96.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
92.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.