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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4465.8
Min RPKM: 41.8
Std RPKM: 751.5
Median RPKM: 834.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
4465.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
4110.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
3474.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
2788.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
2639.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
2564.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
2299.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
2235.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
2232.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
2148.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
2078.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
2040.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
1921.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
1896.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1749.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
1670.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
1660.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
1642.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
1539.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
1489.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
1360.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1351.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1263.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
1233.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
1210.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
1187.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
1184.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
1175.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
1160.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
1150.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
1146.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
1131.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
1124.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
1120.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
1119.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
1116.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1112.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
1107.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
1089.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
1070.3
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
1070.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
1059.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
1048.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
1013.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
1005.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
999.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
984.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
972.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
938.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
924.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
917.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
911.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
906.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
902.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
900.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
881.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
878.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
850.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
834.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
808.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
801.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
797.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
793.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
776.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
753.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
750.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
737.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
712.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
700.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
696.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
692.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
664.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
633.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
618.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
599.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
597.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
592.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
590.4
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
577.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
563.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
561.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
557.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
552.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
548.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
541.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
537.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
528.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
524.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
503.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
487.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
484.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
475.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
472.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
451.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
446.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
413.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
397.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
382.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
375.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
363.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
359.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
359.1
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
348.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
347.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
331.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
318.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
318.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
314.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
313.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
294.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
293.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
265.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
264.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
237.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
168.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
91.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
41.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.