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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 102.2
Min RPKM: 43.0
Std RPKM: 11.8
Median RPKM: 70.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
102.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
100.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
100.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
99.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
96.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
93.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
93.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
91.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
91.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
90.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
87.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
86.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
85.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
85.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
82.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
81.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
81.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
80.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
80.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
80.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
80.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
80.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
79.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
79.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
79.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
79.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
77.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
77.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
77.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
77.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
76.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
76.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
75.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
75.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
75.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
75.0
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
74.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
74.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
74.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
74.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
74.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
73.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
73.4
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
73.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
72.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
72.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
72.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
72.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
71.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
71.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
71.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
70.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
70.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
70.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
69.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
69.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
69.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
68.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
68.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
68.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
68.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
68.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
67.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
67.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
67.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
67.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
67.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
66.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
66.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
66.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
66.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
66.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
66.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
66.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
65.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
65.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
65.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
65.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
65.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
65.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
64.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
64.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
64.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
63.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
63.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
62.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
61.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
61.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
61.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
60.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
60.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
60.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
59.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
56.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
56.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
54.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
53.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
51.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
51.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
51.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
51.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
48.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
47.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
43.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.