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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 367.4
Min RPKM: 88.1
Std RPKM: 49.3
Median RPKM: 154.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
367.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
310.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
281.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
269.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
269.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
263.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
257.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
256.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
238.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
237.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
236.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
233.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
228.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
222.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
218.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
210.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
209.6
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
205.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
204.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
202.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
202.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
200.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
200.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
199.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
198.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
197.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
197.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
196.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
190.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
190.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
189.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
187.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
185.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
185.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
182.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
177.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
177.4
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
176.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
174.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
173.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
172.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
169.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
168.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
167.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
167.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
166.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
165.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
163.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
162.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
161.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
160.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
154.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
154.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
154.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
154.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
153.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
153.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
151.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
150.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
147.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
145.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
143.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
143.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
143.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
141.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
141.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
141.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
139.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
139.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
139.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
139.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
138.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
137.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
137.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
136.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
134.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
133.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
133.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
131.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
129.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
128.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
128.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
127.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
126.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
126.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
126.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
125.4
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
123.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
123.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
123.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
122.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
120.9
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
120.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
117.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
114.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
113.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
110.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
109.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
107.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
107.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
106.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
96.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
90.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
88.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.