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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 837.8
Min RPKM: 282.2
Std RPKM: 111.0
Median RPKM: 508.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
837.8
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
794.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
788.3
GTEX-RU72-2226-SM-46MUE
50-59 years, female
765.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
707.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
694.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
682.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
668.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
665.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
641.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
637.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
630.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
628.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
617.4
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
601.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
595.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
594.4
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
592.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
567.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
565.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
565.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
562.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
562.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
561.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
556.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
554.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
553.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
551.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
550.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
549.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
548.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
545.3
GTEX-11I78-1926-SM-59878
50-59 years, female
544.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
542.5
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
542.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
541.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
537.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
537.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
536.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
533.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
527.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
527.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
524.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
521.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
520.0
GTEX-Q734-0726-SM-48TZP
40-49 years, female
515.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
514.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
513.0
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
508.4
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
506.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
506.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
503.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
494.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
491.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
477.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
470.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
464.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
464.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
461.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
461.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
461.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
458.8
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
458.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
454.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
447.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
446.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
439.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
436.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
432.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
431.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
430.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
428.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
427.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
426.6
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
426.6
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
426.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
420.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
413.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
408.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
401.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
399.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
394.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
381.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
379.3
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
377.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
371.7
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
368.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
364.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
359.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
348.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
344.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
341.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
324.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
319.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
318.3
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
310.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
282.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.