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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 432.7
Min RPKM: 160.8
Std RPKM: 52.5
Median RPKM: 250.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
432.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
382.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
379.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
362.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
354.9
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
351.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
341.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
337.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
336.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
332.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
332.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
331.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
326.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
324.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
320.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
318.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
317.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
314.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
313.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
313.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
312.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
311.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
311.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
308.3
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
305.9
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
304.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
303.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
297.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
294.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
293.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
290.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
289.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
288.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
288.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
287.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
286.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
286.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
283.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
283.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
279.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
278.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
278.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
272.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
269.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
269.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
268.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
263.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
258.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
258.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
256.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
252.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
251.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
250.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
248.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
248.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
246.4
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
246.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
243.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
240.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
239.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
239.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
238.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
237.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
237.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
237.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
236.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
236.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
233.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
232.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
231.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
230.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
230.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
229.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
228.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
227.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
226.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
226.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
225.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
224.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
224.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
222.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
218.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
217.5
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
217.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
217.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
216.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
215.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
214.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
212.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
211.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
210.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
204.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
199.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
198.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
197.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
193.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
189.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
188.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
187.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
187.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
186.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
177.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
163.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
160.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.