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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1360.5
Min RPKM: 314.9
Std RPKM: 187.9
Median RPKM: 572.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1360.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1272.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1049.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1004.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
939.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
934.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
931.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
894.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
891.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
855.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
852.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
844.9
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
835.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
799.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
778.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
762.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
735.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
724.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
722.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
714.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
712.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
703.8
GTEX-RU72-2226-SM-46MUE
50-59 years, female
702.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
700.2
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
698.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
683.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
679.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
678.5
GTEX-S32W-1226-SM-4AD67
50-59 years, female
657.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
657.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
654.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
644.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
635.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
635.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
631.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
629.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
628.5
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
624.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
619.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
614.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
610.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
600.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
598.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
589.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
587.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
583.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
573.0
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
572.6
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
572.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
562.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
558.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
551.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
538.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
537.6
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
536.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
534.5
GTEX-11I78-1926-SM-59878
50-59 years, female
529.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
526.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
522.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
522.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
520.7
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
517.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
516.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
511.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
508.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
508.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
507.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
502.2
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
499.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
493.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
491.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
489.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
482.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
478.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
474.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
469.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
469.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
466.8
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
437.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
436.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
433.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
433.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
433.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
431.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
429.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
417.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
407.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
407.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
397.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
386.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
383.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
378.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
377.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
374.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
368.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
351.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
314.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.