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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 864.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 654.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 620.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1085.4
Min RPKM: 79.2
Std RPKM: 116.0
Median RPKM: 247.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1085.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
680.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
604.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
603.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
598.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
568.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
550.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
525.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
514.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
496.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
487.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
481.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
468.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
464.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
453.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
453.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
434.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
418.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
414.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
410.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
407.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
403.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
396.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
396.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
391.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
390.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
384.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
380.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
370.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
364.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
364.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
362.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
361.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
360.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
357.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
356.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
354.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
354.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
354.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
349.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
349.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
346.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
340.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
338.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
337.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
334.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
332.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
331.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
326.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
324.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
321.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
319.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
319.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
318.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
315.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
314.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
311.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
310.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
309.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
308.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
308.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
305.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
304.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
304.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
304.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
302.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
296.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
295.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
291.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
289.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
287.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
287.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
283.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
283.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
282.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
281.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
280.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
279.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
279.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
278.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
275.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
275.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
274.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
274.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
273.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
273.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
271.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
271.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
271.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
270.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
269.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
268.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
266.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
266.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
265.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
261.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
260.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
260.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
258.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
256.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
256.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
255.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
253.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
252.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
250.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
250.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
247.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
247.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
246.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
244.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
243.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
243.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
242.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
242.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
241.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
240.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
238.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
236.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
236.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
236.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
234.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
232.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
232.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
232.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
231.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
230.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
230.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
228.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
228.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
228.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
228.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
227.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
227.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
226.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
226.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
225.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
223.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
223.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
222.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
222.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
222.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
221.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
221.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
221.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
221.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
219.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
218.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
217.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
212.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
211.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
211.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
210.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
210.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
209.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
209.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
208.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
207.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
205.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
204.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
203.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
202.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
201.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
197.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
197.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
197.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
195.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
193.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
192.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
192.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
190.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
189.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
189.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
189.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
188.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
185.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
181.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
181.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
180.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
180.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
180.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
179.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
179.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
178.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
177.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
172.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
171.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
171.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
171.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
168.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
168.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
167.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
165.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
164.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
163.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
160.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
160.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
159.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
157.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
156.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
154.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
142.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
142.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
138.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
138.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
137.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
135.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
132.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
131.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
123.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
121.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
117.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
113.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
91.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
79.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.