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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 399.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 768.3
Min RPKM: 27.6
Std RPKM: 121.3
Median RPKM: 252.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
768.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
638.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
609.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
606.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
501.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
487.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
473.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
456.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
455.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
439.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
414.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
410.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
384.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
379.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
378.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
374.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
367.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
366.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
358.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
358.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
353.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
346.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
345.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
344.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
341.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
335.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
333.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
329.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
320.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
319.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
315.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
309.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
307.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
306.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
303.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
303.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
302.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
301.6
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
301.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
284.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
283.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
280.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
279.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
279.8
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
279.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
274.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
273.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
271.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
269.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
266.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
264.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
263.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
261.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
258.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
257.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
253.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
253.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
252.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
251.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
251.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
247.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
239.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
239.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
239.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
236.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
233.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
233.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
233.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
232.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
230.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
230.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
229.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
228.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
227.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
226.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
224.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
214.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
211.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
207.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
203.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
199.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
198.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
196.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
192.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
188.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
186.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
183.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
176.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
174.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
173.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
173.3
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
173.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
168.0
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
164.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
158.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
157.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
155.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
154.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
152.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
150.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
150.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
150.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
144.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
131.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
128.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
128.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
116.7
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
101.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
85.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
75.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
67.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
65.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
46.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
27.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 271.7
Samples: 108
Max RPKM: 730.6
Min RPKM: 21.1
Std RPKM: 148.2
Median RPKM: 239.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
730.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
662.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
644.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
628.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
561.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
545.2
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
543.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
527.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
524.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
515.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
504.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
503.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
467.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
465.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
455.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
449.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
435.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
429.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
422.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
402.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
397.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
381.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
367.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
366.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
364.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
364.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
357.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
348.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
341.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
336.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
334.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
316.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
316.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
313.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
313.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
308.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
308.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
304.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
301.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
293.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
289.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
289.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
288.0
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
287.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
284.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
279.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
274.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
273.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
271.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
270.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
260.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
257.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
249.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
239.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
238.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
238.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
236.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
236.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
233.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
226.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
223.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
211.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
209.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
209.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
206.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
205.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
200.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
197.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
189.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
184.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
180.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
175.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
175.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
175.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
174.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
172.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
171.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
170.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
169.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
164.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
164.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
161.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
157.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
150.8
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
146.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
146.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
141.5
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
137.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
129.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
127.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
127.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
120.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
119.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
113.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
113.5
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
112.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
106.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
103.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
103.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
96.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
96.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
96.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
93.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
89.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
86.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
72.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
60.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
21.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.