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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1860.1
Min RPKM: 85.4
Std RPKM: 298.0
Median RPKM: 791.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1860.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1498.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
1489.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
1421.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
1349.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
1338.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
1311.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
1261.8
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
1260.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
1250.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
1233.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
1212.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
1195.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1171.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
1155.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
1147.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
1146.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
1132.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
1104.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
1101.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
1092.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
1075.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
1061.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1060.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
1042.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
1033.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
1028.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
1028.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
1027.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
1001.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
942.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
910.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
898.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
893.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
893.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
892.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
887.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
873.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
871.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
866.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
860.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
855.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
853.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
849.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
845.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
845.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
833.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
832.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
823.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
821.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
820.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
811.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
810.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
809.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
805.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
803.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
793.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
792.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
791.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
788.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
785.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
773.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
765.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
756.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
755.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
742.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
740.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
738.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
736.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
725.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
709.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
693.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
689.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
677.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
670.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
669.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
659.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
656.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
640.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
639.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
635.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
631.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
628.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
628.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
611.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
604.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
599.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
595.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
594.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
593.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
588.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
586.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
570.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
568.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
557.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
532.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
525.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
523.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
521.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
516.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
515.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
507.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
495.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
490.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
488.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
479.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
477.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
468.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
458.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
456.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
420.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
345.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
277.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
246.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
194.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
165.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
85.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.