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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 78.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 87.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 11.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1409.0
Min RPKM: 19.0
Std RPKM: 139.8
Median RPKM: 139.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1409.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
677.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
541.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
528.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
526.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
517.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
495.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
469.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
446.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
442.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
432.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
414.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
404.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
388.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
377.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
363.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
347.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
344.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
341.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
338.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
329.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
317.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
308.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
302.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
300.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
296.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
292.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
279.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
269.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
256.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
253.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
250.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
246.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
245.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
244.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
241.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
238.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
237.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
237.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
236.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
232.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
229.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
226.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
225.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
224.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
221.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
218.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
207.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
207.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
204.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
201.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
199.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
197.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
195.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
193.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
193.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
192.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
192.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
188.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
188.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
188.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
187.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
186.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
185.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
179.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
177.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
176.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
175.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
175.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
172.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
172.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
172.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
172.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
171.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
170.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
170.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
168.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
168.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
167.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
167.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
160.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
159.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
159.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
158.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
158.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
157.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
156.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
156.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
156.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
154.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
154.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
154.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
154.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
152.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
151.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
150.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
149.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
147.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
147.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
146.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
146.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
146.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
145.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
145.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
143.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
141.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
139.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
138.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
138.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
136.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
134.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
132.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
131.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
131.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
130.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
128.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
125.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
125.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
125.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
123.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
122.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
122.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
120.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
120.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
120.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
119.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
119.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
118.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
117.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
114.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
114.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
113.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
110.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
109.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
109.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
109.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
108.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
107.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
107.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
107.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
106.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
105.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
105.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
103.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
101.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
100.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
100.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
100.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
99.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
98.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
98.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
97.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
96.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
95.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
93.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
93.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
93.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
92.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
92.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
90.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
88.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
86.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
86.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
85.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
85.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
84.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
83.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
82.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
79.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
79.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
78.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
77.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
76.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
75.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
74.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
70.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
70.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
69.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
68.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
68.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
67.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
67.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
65.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
64.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
64.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
63.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
61.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
60.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
59.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
59.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
59.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
58.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
55.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
54.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
54.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
53.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
51.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
50.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
50.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
50.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
49.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
47.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
46.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
46.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
45.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
44.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
42.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
41.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
38.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
38.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
36.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
26.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
26.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
19.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.