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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 135.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 4.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 14.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 69.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 15.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 45.7
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 144.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 74.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 796.4
Min RPKM: 4.0
Std RPKM: 139.4
Median RPKM: 67.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
796.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
697.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
543.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
482.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
464.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
444.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
413.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
412.5
GTEX-13112-1426-SM-5EGH8
50-59 years, male
347.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
325.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
323.6
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
319.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
311.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
308.9
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
279.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
264.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
199.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
197.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
193.7
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
190.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
185.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
183.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
179.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
172.7
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
171.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
168.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
163.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
156.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
141.1
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
134.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
134.6
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
133.8
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
126.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
124.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
124.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
117.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
113.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
112.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
110.6
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
108.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
105.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
102.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
101.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
101.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
96.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
93.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
92.4
GTEX-X261-1726-SM-4PQYT
50-59 years, male
91.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
90.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
89.5
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
87.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
87.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
87.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
86.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
79.0
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
77.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
76.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
74.1
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
69.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
67.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
63.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
61.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
60.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
58.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
57.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
57.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
56.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
53.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
52.7
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
52.1
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
51.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
51.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
51.2
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
50.4
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
47.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
46.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
45.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
45.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
44.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
44.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
43.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
43.5
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
42.0
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
41.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
41.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
40.0
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
37.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
37.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
35.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
33.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
30.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
29.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
28.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
28.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
28.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
27.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
26.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
25.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
23.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
23.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
23.5
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
23.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
23.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
23.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
22.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
22.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
20.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
16.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
16.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
14.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
14.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
12.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
11.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
11.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
11.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
5.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
5.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
4.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
4.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
