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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 621.1
Min RPKM: 203.5
Std RPKM: 99.7
Median RPKM: 387.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
621.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
619.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
601.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
598.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
594.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
579.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
558.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
550.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
527.1
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
526.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
519.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
513.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
513.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
511.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
511.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
510.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
510.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
503.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
501.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
491.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
484.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
476.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
476.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
462.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
461.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
459.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
458.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
457.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
456.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
453.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
449.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
449.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
445.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
440.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
437.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
434.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
434.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
433.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
430.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
427.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
422.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
421.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
416.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
404.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
402.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
401.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
401.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
399.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
398.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
396.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
394.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
390.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
383.6
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
383.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
381.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
380.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
380.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
375.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
373.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
372.6
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
371.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
371.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
369.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
357.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
356.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
355.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
353.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
348.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
346.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
341.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
338.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
336.6
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
336.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
335.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
332.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
332.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
325.8
GTEX-Q734-0226-SM-48U1A
40-49 years, female
324.6
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
321.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
320.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
318.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
316.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
310.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
310.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
306.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
300.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
297.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
295.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
291.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
283.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
280.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
275.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
267.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
264.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
253.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
244.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
243.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
233.7
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
230.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
223.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
221.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
217.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
204.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
203.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.