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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 324.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 350.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 83.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 689.7
Min RPKM: 61.6
Std RPKM: 92.1
Median RPKM: 175.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
689.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
567.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
499.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
478.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
478.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
465.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
454.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
427.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
419.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
409.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
398.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
380.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
347.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
335.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
324.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
322.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
319.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
319.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
313.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
299.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
292.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
291.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
287.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
285.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
280.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
277.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
275.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
272.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
271.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
266.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
266.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
264.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
260.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
259.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
258.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
258.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
254.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
252.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
251.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
250.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
250.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
250.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
248.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
246.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
238.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
237.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
236.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
236.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
236.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
236.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
235.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
233.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
233.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
231.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
227.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
225.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
225.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
224.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
224.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
224.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
222.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
220.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
220.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
220.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
219.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
218.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
217.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
217.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
217.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
217.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
215.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
214.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
213.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
213.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
213.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
212.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
211.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
210.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
210.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
209.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
208.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
205.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
204.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
203.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
200.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
200.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
198.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
198.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
198.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
197.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
195.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
192.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
191.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
191.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
189.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
189.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
188.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
188.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
187.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
184.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
182.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
178.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
178.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
176.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
176.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
176.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
175.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
174.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
173.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
173.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
172.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
172.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
171.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
171.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
169.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
169.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
168.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
166.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
165.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
164.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
163.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
163.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
162.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
161.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
161.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
160.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
160.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
160.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
159.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
159.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
158.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
158.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
157.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
153.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
153.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
153.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
153.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
152.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
151.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
151.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
151.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
150.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
150.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
147.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
146.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
145.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
143.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
143.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
143.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
142.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
142.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
142.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
141.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
141.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
140.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
139.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
139.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
139.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
138.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
137.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
137.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
135.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
133.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
132.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
132.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
130.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
129.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
128.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
128.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
127.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
126.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
125.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
125.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
125.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
124.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
124.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
123.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
123.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
123.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
123.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
122.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
121.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
120.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
119.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
115.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
114.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
112.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
108.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
107.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
107.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
107.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
101.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
101.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
99.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
99.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
96.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
96.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
92.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
89.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
89.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
88.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
87.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
87.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
85.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
85.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
84.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
82.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
79.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
79.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
78.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
77.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
75.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
74.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
61.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.