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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 1070.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1128.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 2061
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 967.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 925
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1037
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 809.1
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1214.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1215.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1261.2
Min RPKM: 91.1
Std RPKM: 169.2
Median RPKM: 448.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
1261.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
1094.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
951.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
850.6
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
828.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
805.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
790.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
787.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
786.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
784.9
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
771.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
746.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
745.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
743.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
741.7
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
741.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
737.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
730.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
721.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
721.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
713.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
707.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
702.2
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
698.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
698.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
674.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
674.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
665.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
665.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
662.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
660.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
650.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
649.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
646.3
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
646.3
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
637.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
605.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
589.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
582.7
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
576.3
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
573.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
571.5
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
563.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
561.3
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
557.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
555.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
546.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
546.0
GTEX-RN64-2326-SM-48FDW
50-59 years, male
544.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
536.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
532.2
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
531.4
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
528.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
522.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
522.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
522.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
517.5
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
517.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
509.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
502.4
GTEX-V955-1926-SM-4KL1L
60-69 years, male
500.8
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
500.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
498.8
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
498.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
497.0
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
495.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
493.0
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
489.1
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
488.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
486.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
486.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
479.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
479.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
477.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
475.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
475.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
470.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
469.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
468.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
466.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
460.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
460.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
459.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
457.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
452.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
450.1
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
447.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
446.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
444.2
GTEX-13111-1526-SM-5EGJX
50-59 years, male
441.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
440.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
438.7
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
437.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
436.7
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
436.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
436.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
434.8
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
434.8
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
431.0
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
430.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
429.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
428.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
427.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
427.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
427.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
427.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
425.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
425.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
424.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
424.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
419.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
418.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
418.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
417.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
415.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
415.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
414.7
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
413.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
413.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
412.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
411.2
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
411.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
404.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
397.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
397.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
390.7
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
389.6
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
389.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
389.0
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
385.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
381.1
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
381.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
373.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
372.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
360.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
360.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
359.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
352.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
346.6
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
346.1
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
342.3
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
341.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
340.2
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
339.1
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
338.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
337.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
335.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
333.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
329.8
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
327.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
320.9
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
317.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
310.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
309.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
307.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
303.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
300.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
288.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
287.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
278.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
271.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
269.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
264.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
262.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
256.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
256.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
251.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
240.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
239.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
218.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
190.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
91.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.