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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 635.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 46.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 138.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 435.9
Min RPKM: 13.2
Std RPKM: 79.7
Median RPKM: 100.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
435.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
420.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
358.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
358.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
353.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
352.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
344.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
324.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
316.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
279.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
278.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
278.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
275.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
267.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
258.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
255.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
254.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
244.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
244.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
239.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
237.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
234.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
231.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
224.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
222.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
221.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
219.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
213.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
213.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
211.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
208.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
207.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
202.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
202.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
196.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
189.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
186.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
184.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
184.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
183.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
183.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
183.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
182.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
182.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
178.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
178.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
178.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
168.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
168.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
165.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
164.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
164.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
163.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
160.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
157.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
156.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
155.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
151.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
150.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
150.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
148.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
147.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
142.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
142.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
140.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
140.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
140.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
140.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
139.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
135.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
135.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
134.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
132.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
131.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
131.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
131.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
131.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
131.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
130.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
130.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
129.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
129.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
128.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
127.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
120.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
120.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
115.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
115.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
114.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
114.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
111.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
111.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
110.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
110.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
110.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
109.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
109.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
109.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
108.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
108.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
107.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
107.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
104.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
104.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
102.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
101.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
100.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
99.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
99.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
98.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
97.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
96.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
95.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
95.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
94.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
93.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
93.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
93.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
93.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
92.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
92.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
91.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
91.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
90.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
90.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
89.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
89.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
89.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
88.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
87.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
86.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
86.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
85.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
85.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
84.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
84.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
84.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
83.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
82.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
81.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
81.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
80.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
79.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
77.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
77.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
75.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
75.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
74.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
73.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
73.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
72.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
71.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
71.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
71.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
70.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
70.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
69.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
69.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
67.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
67.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
65.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
65.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
63.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
63.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
63.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
62.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
62.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
62.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
61.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
59.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
58.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
57.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
57.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
57.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
56.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
56.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
55.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
54.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
54.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
53.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
52.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
52.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
52.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
52.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
52.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
50.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
50.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
48.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
48.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
46.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
45.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
45.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
45.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
44.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
42.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
40.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
39.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
39.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
38.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
35.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
35.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
34.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
34.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
33.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
33.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
29.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
29.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
26.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
25.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
21.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
20.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
19.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
16.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
13.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.