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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 170.0
Min RPKM: 0.0
Std RPKM: 37.6
Median RPKM: 18.8
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
170.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
136.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
132.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
120.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
115.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
114.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
96.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
95.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
85.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
84.9
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
81.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
77.8
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
76.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
72.1
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
69.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
69.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
68.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
67.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
66.9
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
64.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
64.0
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
63.5
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
62.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
58.9
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
55.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
54.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
51.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
49.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
47.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
46.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
42.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
41.2
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
41.0
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
39.1
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
38.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
37.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
37.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
36.9
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
33.7
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
30.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
26.6
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
26.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
26.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
24.7
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
23.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
20.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
20.5
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
19.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
18.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
18.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
16.6
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
15.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
14.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
13.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
13.3
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
12.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
12.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
11.6
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
9.3
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
8.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
6.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
5.8
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
5.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
3.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
3.8
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
2.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
2.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
1.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
1.6
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
1.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
1.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
1.2
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
0.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
0.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.5
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
0.5
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.5
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.5
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.4
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.2
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.2
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.1
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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