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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 451.2
Min RPKM: 17.0
Std RPKM: 64.5
Median RPKM: 144.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
451.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
352.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
338.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
271.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
271.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
263.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
261.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
250.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
245.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
243.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
237.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
235.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
234.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
233.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
224.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
216.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
215.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
209.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
209.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
204.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
204.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
199.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
198.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
194.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
194.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
194.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
194.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
192.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
188.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
187.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
187.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
184.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
181.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
181.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
180.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
179.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
177.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
172.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
171.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
171.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
169.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
169.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
168.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
166.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
165.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
161.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
160.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
159.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
157.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
156.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
156.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
155.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
153.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
152.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
151.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
150.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
148.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
145.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
144.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
144.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
142.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
141.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
141.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
141.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
136.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
135.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
135.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
135.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
135.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
134.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
134.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
134.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
133.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
130.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
128.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
128.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
125.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
125.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
124.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
124.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
124.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
123.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
121.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
120.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
119.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
118.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
117.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
116.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
115.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
114.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
112.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
110.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
110.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
108.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
107.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
107.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
105.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
104.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
104.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
99.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
99.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
95.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
90.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
88.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
85.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
83.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
79.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
77.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
76.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
74.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
68.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
65.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
61.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
50.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
28.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
27.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
17.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.