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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 365.5
Min RPKM: 15.1
Std RPKM: 57.2
Median RPKM: 93.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
365.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
205.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
204.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
203.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
197.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
190.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
188.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
188.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
183.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
181.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
179.0
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
177.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
172.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
169.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
169.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
165.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
162.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
161.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
161.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
160.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
159.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
155.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
154.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
152.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
150.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
149.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
146.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
145.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
145.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
142.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
141.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
140.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
137.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
134.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
132.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
132.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
131.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
130.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
129.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
126.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
125.9
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
121.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
121.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
120.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
120.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
116.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
114.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
113.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
110.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
110.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
106.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
104.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
104.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
103.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
101.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
100.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
99.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
95.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
93.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
93.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
91.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
90.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
88.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
86.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
83.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
81.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
80.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
78.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
78.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
77.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
76.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
75.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
73.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
72.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
72.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
71.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
70.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
70.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
66.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
66.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
66.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
63.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
62.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
61.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
61.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
59.5
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
58.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
58.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
57.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
56.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
55.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
55.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
54.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
51.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
50.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
50.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
47.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
39.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
39.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
36.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
35.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
33.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
33.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
30.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
30.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
28.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
28.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
27.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
27.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
27.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
26.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
26.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
25.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
23.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
17.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
16.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
15.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.