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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 47.5
Min RPKM: 0.1
Std RPKM: 9.1
Median RPKM: 19.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
47.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
41.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
40.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
39.2
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
38.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
37.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
37.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
37.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
35.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
35.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
31.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
31.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
30.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
30.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
29.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
28.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
28.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
27.6
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
26.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
25.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
25.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
25.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
25.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
25.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
24.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
24.3
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
24.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
24.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
23.7
GTEX-QCQG-1226-SM-48U23
50-59 years, female
22.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
21.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
21.8
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
21.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
21.5
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
21.5
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
21.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
21.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
21.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
21.2
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
20.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
20.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
20.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
20.5
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
20.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
19.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
19.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
19.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
19.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
19.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
18.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
18.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
18.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
18.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
18.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
17.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
17.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
17.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
17.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
17.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
17.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
16.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
16.5
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
16.0
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
15.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
15.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
15.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
15.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
14.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
14.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
14.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
14.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
14.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
14.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
13.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
13.8
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
13.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
12.9
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
12.9
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
12.8
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
12.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
12.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
12.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
11.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
11.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
11.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
11.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
11.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
11.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
9.7
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
8.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
6.6
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
4.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
2.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
2.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.8
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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