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HOXD9
COLON - Expression summary
RNA expressioni
HPA:2.9TPM
GTEx:10.3RPKM
FANTOM5:2.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 2.9
overview Male, age 54 Sample 1
TPM: 5.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 10.3
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 18.1
Samples: 149

Max RPKM: 57.4
Min RPKM: 0.7
Std RPKM: 10.1
Median RPKM: 16.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 57.4
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 54.1
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 51.2
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 44.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 39.9
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 38.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 37.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 36.3
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 36.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 35.2
Show all
Colon - Transverse
RPKM: 4.4
Samples: 196

Max RPKM: 33.7
Min RPKM: 0.1
Std RPKM: 3.4
Median RPKM: 3.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 33.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 19.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 17.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 13.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 11.3
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 10.9
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 10.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 10.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 10.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 10.2
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 2.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 2.3
FF:10014-101C5 62,83,84 years, mixed 2.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.