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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 473.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 213.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 32.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2218.6
Min RPKM: 0.0
Std RPKM: 336.8
Median RPKM: 119.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
2218.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1682.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1573.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
1492.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1238.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1159.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1149.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
898.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
867.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
847.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
806.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
792.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
757.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
750.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
748.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
729.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
727.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
711.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
702.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
682.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
668.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
661.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
657.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
656.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
638.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
636.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
625.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
596.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
593.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
583.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
581.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
579.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
579.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
530.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
526.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
525.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
503.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
495.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
492.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
484.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
469.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
459.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
453.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
432.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
427.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
425.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
419.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
416.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
412.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
398.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
379.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
371.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
365.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
361.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
360.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
344.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
339.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
339.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
336.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
334.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
325.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
317.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
303.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
298.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
297.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
294.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
292.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
285.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
273.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
268.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
258.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
255.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
255.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
252.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
248.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
244.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
242.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
241.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
240.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
238.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
238.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
232.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
222.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
213.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
206.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
199.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
195.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
190.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
178.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
173.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
170.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
169.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
168.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
164.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
160.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
158.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
155.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
155.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
153.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
153.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
150.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
144.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
143.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
137.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
135.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
124.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
121.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
117.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
114.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
112.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
100.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
100.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
95.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
93.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
92.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
86.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
83.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
72.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
70.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
67.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
66.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
64.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
62.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
52.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
45.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
32.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
29.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
29.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
26.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
20.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
17.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
17.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
17.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
13.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
9.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
4.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
4.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
2.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
1.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
0.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
0.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
0.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
0.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
0.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
0.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
0.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
0.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
0.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
0.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
0.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
0.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
0.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
0.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
0.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
0.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
0.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
0.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
0.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
0.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
0.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
0.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
0.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
0.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
0.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
0.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
0.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
0.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
0.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
0.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
0.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
0.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
0.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
0.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
0.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
0.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
0.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
0.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
0.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
0.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
0.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
0.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
0.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
0.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
0.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
0.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
0.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
0.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
0.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
0.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
0.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
0.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
0.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
0.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
0.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
0.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
0.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
0.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
0.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
0.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
0.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
0.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
0.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
0.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
0.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
0.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
0.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
0.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
0.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
0.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
0.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
0.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
0.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
0.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
0.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.