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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 22.2
Min RPKM: 1.6
Std RPKM: 3.8
Median RPKM: 6.4
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
22.2
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
18.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
14.3
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
13.4
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
13.4
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
12.7
GTEX-1445S-2926-SM-5O993
60-69 years, male
12.0
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
11.7
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
10.3
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
9.3
GTEX-13113-1526-SM-5EGHV
60-69 years, female
9.0
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
9.0
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
8.9
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
8.8
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
8.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
8.3
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
8.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
8.0
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
7.9
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
7.5
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
7.4
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
7.3
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
7.3
GTEX-X261-2426-SM-4PQZU
50-59 years, male
7.1
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
7.1
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
7.0
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
6.5
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
6.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
6.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
6.3
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
5.9
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
5.9
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
5.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
5.8
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
5.7
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
5.6
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
5.6
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
5.4
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
5.3
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
5.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
5.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
4.9
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
4.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
4.6
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
4.5
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
4.3
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
4.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
4.0
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
3.9
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
3.6
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
3.3
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
3.1
GTEX-Y111-2626-SM-4TT24
50-59 years, male
3.1
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
3.0
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
2.8
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
2.7
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
1.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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