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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 44.8
Min RPKM: 5.6
Std RPKM: 6.9
Median RPKM: 17.3
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
44.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
33.3
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
32.3
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
30.0
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
28.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
26.2
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
25.7
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
25.5
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
24.2
GTEX-X261-2426-SM-4PQZU
50-59 years, male
22.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
21.5
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
21.3
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
19.6
GTEX-13113-1526-SM-5EGHV
60-69 years, female
19.6
GTEX-1445S-2926-SM-5O993
60-69 years, male
19.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
19.4
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
19.4
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
19.2
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
19.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
19.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
18.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
18.6
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
18.5
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
18.4
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
18.3
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
18.2
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
17.9
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
17.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
17.3
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
17.1
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
16.9
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
16.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
16.1
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
15.9
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
15.7
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
15.7
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
14.6
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
14.4
GTEX-11P82-0926-SM-5986X
20-29 years, male
14.0
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
13.8
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
13.4
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
13.2
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
13.2
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
13.0
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
12.4
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
12.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
12.2
GTEX-13O21-1926-SM-5MR39
50-59 years, male
12.1
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
11.2
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
10.6
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
10.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
9.8
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
9.3
GTEX-Y111-2626-SM-4TT24
50-59 years, male
8.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
8.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
7.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
5.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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