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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 445.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 584.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 210.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 498.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 533
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 443.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 474.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 348.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 471
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 439.9
Min RPKM: 76.8
Std RPKM: 67.1
Median RPKM: 249.0
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
439.9
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
407.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
390.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
380.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
369.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
368.4
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
363.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
360.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
355.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
354.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
349.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
349.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
342.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
340.0
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
335.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
335.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
333.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
332.5
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
330.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
326.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
325.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
323.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
317.0
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
316.1
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
312.4
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
310.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
309.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
306.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
304.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
303.8
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
298.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
298.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
297.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
297.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
296.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
295.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
294.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
294.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
291.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
291.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
290.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
290.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
288.8
GTEX-X261-2326-SM-4PQYU
50-59 years, male
288.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
286.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
285.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
285.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
284.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
282.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
282.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
281.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
280.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
280.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
279.6
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
279.5
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
278.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
276.5
GTEX-S95S-1126-SM-4B64E
60-69 years, male
276.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
274.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
274.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
274.2
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
271.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
267.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
266.2
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
265.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
264.8
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
264.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
264.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
262.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
262.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
262.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
261.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
260.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
259.9
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
259.6
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
259.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
258.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
257.8
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
255.3
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
254.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
253.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
253.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
252.4
GTEX-V955-1926-SM-4KL1L
60-69 years, male
252.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
252.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
250.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
247.4
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
246.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
245.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
245.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
244.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
244.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
242.7
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
242.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
242.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
241.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
240.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
240.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
237.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
237.6
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
236.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
236.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
234.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
234.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
233.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
232.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
231.8
GTEX-R55C-1426-SM-48FED
40-49 years, male
231.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
231.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
231.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
230.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
230.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
230.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
230.0
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
229.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
227.2
GTEX-12696-0226-SM-5EGL3
60-69 years, male
225.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
224.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
221.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
220.5
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
219.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
219.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
218.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
218.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
217.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
214.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
214.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
210.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
210.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
210.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
207.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
206.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
205.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
204.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
200.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
200.6
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
197.9
GTEX-R55D-0126-SM-48FEL
50-59 years, male
194.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
193.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
193.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
192.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
192.0
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
191.1
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
189.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
188.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
188.6
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
186.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
185.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
179.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
174.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
166.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
156.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
152.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
149.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
148.3
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
148.2
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
145.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
139.2
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
138.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
137.0
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
130.7
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
128.6
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
127.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
122.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
116.5
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
112.7
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
105.3
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
102.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
89.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
87.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
83.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
76.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.