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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 391.0
Min RPKM: 87.6
Std RPKM: 49.1
Median RPKM: 160.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
391.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
326.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
324.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
319.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
283.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
278.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
242.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
235.3
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
227.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
227.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
220.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
219.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
211.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
205.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
201.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
198.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
198.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
193.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
192.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
186.4
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
185.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
185.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
184.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
181.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
179.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
179.3
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
176.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
173.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
173.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
173.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
172.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
171.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
171.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
170.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
169.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
169.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
168.4
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
167.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
167.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
166.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
166.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
166.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
165.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
165.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
165.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
165.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
163.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
163.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
163.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
162.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
161.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
160.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
160.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
160.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
159.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
157.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
157.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
155.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
154.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
153.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
152.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
152.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
152.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
152.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
152.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
151.4
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
150.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
150.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
150.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
149.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
147.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
146.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
145.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
144.1
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
142.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
140.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
140.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
138.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
137.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
137.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
137.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
130.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
130.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
128.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
128.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
128.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
127.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
127.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
122.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
121.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
120.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
120.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
119.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
119.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
118.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
117.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
117.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
115.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
115.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
110.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
108.5
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
102.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
102.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
87.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.