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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 546
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 149.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 89.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2897.7
Min RPKM: 51.1
Std RPKM: 425.1
Median RPKM: 255.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
2897.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
2045.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1938.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
1865.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1741.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1633.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
1632.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1602.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1600.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
1319.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
1295.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1228.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1190.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1173.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
1151.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1119.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1099.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1099.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
1053.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1026.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
949.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
936.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
928.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
923.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
921.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
908.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
891.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
883.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
850.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
830.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
820.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
770.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
755.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
717.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
699.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
688.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
684.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
680.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
662.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
642.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
620.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
613.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
596.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
579.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
577.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
570.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
559.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
558.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
536.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
533.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
524.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
518.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
501.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
497.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
495.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
483.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
480.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
461.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
458.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
456.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
452.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
451.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
441.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
440.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
417.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
412.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
404.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
398.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
395.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
395.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
393.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
390.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
389.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
378.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
374.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
358.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
350.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
347.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
337.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
331.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
328.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
318.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
317.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
317.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
312.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
312.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
311.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
308.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
301.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
299.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
294.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
289.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
286.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
285.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
284.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
273.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
272.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
272.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
271.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
271.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
269.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
266.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
262.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
260.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
259.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
257.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
256.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
253.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
252.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
249.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
245.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
242.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
238.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
238.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
229.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
225.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
223.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
221.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
221.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
220.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
219.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
216.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
212.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
212.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
212.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
208.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
206.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
203.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
201.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
201.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
200.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
199.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
196.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
194.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
193.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
192.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
192.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
189.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
187.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
187.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
186.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
186.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
184.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
181.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
180.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
177.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
175.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
170.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
169.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
169.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
169.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
166.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
160.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
157.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
156.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
152.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
152.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
152.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
151.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
150.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
148.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
147.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
147.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
147.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
146.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
146.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
146.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
145.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
144.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
143.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
142.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
142.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
140.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
140.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
137.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
133.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
130.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
129.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
128.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
126.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
125.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
125.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
123.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
121.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
119.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
118.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
112.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
110.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
108.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
106.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
103.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
102.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
101.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
96.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
94.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
94.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
93.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
93.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
91.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
90.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
90.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
88.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
85.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
83.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
82.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
79.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
77.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
75.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
73.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
65.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
64.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
63.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
58.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
51.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.