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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 74.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 43.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 37.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 367.7
Min RPKM: 22.3
Std RPKM: 56.7
Median RPKM: 65.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
367.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
332.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
267.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
263.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
262.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
248.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
236.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
234.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
232.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
208.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
206.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
196.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
195.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
181.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
174.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
172.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
167.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
161.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
161.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
158.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
158.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
157.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
155.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
152.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
152.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
152.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
148.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
146.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
144.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
143.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
143.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
142.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
138.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
135.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
134.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
128.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
128.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
127.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
126.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
126.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
125.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
123.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
122.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
122.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
120.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
120.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
118.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
117.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
116.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
116.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
115.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
114.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
114.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
112.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
112.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
111.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
110.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
109.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
109.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
107.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
106.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
105.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
104.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
104.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
102.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
100.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
99.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
98.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
97.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
97.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
96.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
95.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
94.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
92.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
91.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
90.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
90.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
87.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
85.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
85.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
84.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
83.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
81.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
81.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
81.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
79.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
76.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
75.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
74.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
74.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
73.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
73.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
72.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
72.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
71.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
70.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
70.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
70.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
70.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
68.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
68.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
68.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
67.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
66.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
66.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
66.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
65.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
64.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
64.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
64.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
64.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
62.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
62.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
62.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
62.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
61.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
61.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
61.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
60.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
60.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
60.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
59.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
59.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
59.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
59.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
58.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
58.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
57.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
57.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
56.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
56.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
56.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
55.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
55.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
54.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
54.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
53.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
52.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
51.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
51.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
51.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
51.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
50.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
50.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
50.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
50.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
49.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
49.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
48.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
48.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
48.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
48.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
48.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
47.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
47.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
47.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
47.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
47.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
46.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
46.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
46.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
46.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
46.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
46.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
45.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
45.9
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
45.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
45.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
45.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
45.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
45.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
45.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
45.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
44.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
44.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
43.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
43.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
43.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
43.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
43.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
42.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
42.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
42.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
42.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
42.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
41.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
41.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
41.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
40.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
40.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
40.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
40.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
40.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
39.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
39.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
39.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
39.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
38.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
38.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
37.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
36.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
36.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
35.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
35.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
35.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
34.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
34.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
34.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
34.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
34.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
33.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
28.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
27.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
22.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.