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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 143.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 534.3
Min RPKM: 89.0
Std RPKM: 88.0
Median RPKM: 296.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
534.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
506.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
466.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
466.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
466.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
441.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
441.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
438.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
424.1
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
419.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
405.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
402.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
398.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
396.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
388.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
376.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
375.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
372.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
371.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
369.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
369.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
366.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
365.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
360.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
360.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
357.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
349.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
348.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
348.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
345.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
344.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
343.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
342.7
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
340.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
336.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
336.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
336.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
333.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
329.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
328.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
327.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
327.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
326.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
325.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
325.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
319.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
315.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
312.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
312.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
311.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
311.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
311.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
308.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
306.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
298.1
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
297.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
296.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
296.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
293.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
293.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
293.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
291.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
290.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
289.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
284.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
283.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
283.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
281.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
280.9
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
279.4
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
278.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
276.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
275.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
273.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
271.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
271.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
268.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
268.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
264.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
261.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
260.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
257.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
251.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
250.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
247.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
246.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
235.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
232.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
231.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
231.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
227.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
227.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
222.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
216.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
208.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
208.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
208.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
191.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
182.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
181.9
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
175.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
175.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
168.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
167.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
162.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
159.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
155.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
153.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
144.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
133.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
115.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
100.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
97.2
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
89.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 264.8
Samples: 108
Max RPKM: 502.1
Min RPKM: 72.7
Std RPKM: 88.1
Median RPKM: 266.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
502.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
499.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
463.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
427.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
411.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
409.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
396.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
388.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
381.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
380.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
373.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
370.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
368.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
360.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
357.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
356.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
354.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
354.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
352.2
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
352.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
347.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
345.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
343.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
339.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
323.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
316.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
316.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
314.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
313.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
309.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
309.3
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
305.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
300.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
298.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
296.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
295.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
295.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
294.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
287.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
287.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
285.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
285.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
285.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
283.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
283.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
282.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
281.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
280.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
279.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
277.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
276.8
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
274.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
272.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
268.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
265.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
260.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
255.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
253.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
253.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
252.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
252.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
246.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
246.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
245.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
244.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
242.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
241.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
240.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
238.4
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
238.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
237.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
236.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
234.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
232.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
226.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
226.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
224.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
224.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
221.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
220.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
214.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
213.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
212.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
211.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
208.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
207.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
203.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
201.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
197.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
191.7
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
164.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
162.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
158.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
154.4
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
135.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
131.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
130.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
129.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
128.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
121.2
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
119.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
118.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
118.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
118.0
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
115.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
106.8
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
74.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
72.7
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.