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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 951.7
Min RPKM: 28.2
Std RPKM: 213.8
Median RPKM: 382.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
951.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
825.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
767.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
742.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
737.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
716.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
685.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
685.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
674.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
650.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
648.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
645.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
633.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
624.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
623.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
619.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
615.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
606.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
594.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
593.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
591.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
560.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
558.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
557.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
553.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
553.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
551.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
549.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
532.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
524.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
521.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
521.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
519.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
516.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
515.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
514.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
505.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
500.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
492.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
491.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
477.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
476.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
473.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
472.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
471.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
471.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
455.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
448.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
441.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
439.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
428.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
422.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
416.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
402.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
395.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
395.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
394.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
391.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
382.4
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
374.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
367.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
361.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
351.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
349.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
340.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
337.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
329.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
320.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
319.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
312.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
309.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
309.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
298.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
295.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
286.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
274.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
265.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
253.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
247.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
237.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
219.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
206.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
206.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
195.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
188.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
175.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
168.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
167.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
159.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
157.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
149.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
136.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
136.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
130.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
123.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
118.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
116.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
111.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
109.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
106.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
104.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
103.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
103.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
98.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
95.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
92.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
84.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
77.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
76.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
58.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
50.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
46.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
39.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
38.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
36.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
35.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
28.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.