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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 74.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 20.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 7.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 244.4
Min RPKM: 30.2
Std RPKM: 36.7
Median RPKM: 83.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
244.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
196.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
188.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
186.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
183.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
180.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
173.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
172.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
165.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
164.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
164.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
164.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
157.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
147.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
144.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
142.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
142.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
142.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
139.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
136.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
133.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
132.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
132.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
132.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
130.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
129.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
128.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
126.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
125.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
124.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
124.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
124.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
123.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
123.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
123.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
123.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
123.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
121.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
121.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
120.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
120.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
119.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
119.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
118.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
117.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
115.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
114.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
114.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
113.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
113.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
112.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
111.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
111.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
110.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
110.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
109.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
108.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
108.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
106.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
105.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
105.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
104.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
104.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
103.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
103.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
100.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
100.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
99.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
99.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
98.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
97.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
97.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
96.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
96.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
96.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
95.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
95.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
95.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
94.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
93.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
93.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
92.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
92.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
91.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
91.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
91.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
90.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
90.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
90.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
89.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
89.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
88.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
88.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
88.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
88.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
87.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
87.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
87.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
87.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
87.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
86.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
85.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
84.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
84.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
84.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
83.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
83.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
83.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
82.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
81.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
81.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
81.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
81.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
81.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
81.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
80.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
79.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
79.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
79.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
78.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
78.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
78.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
78.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
78.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
77.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
77.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
77.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
77.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
76.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
76.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
76.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
75.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
75.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
73.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
73.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
73.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
72.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
72.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
72.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
71.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
71.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
70.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
70.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
69.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
69.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
68.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
67.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
66.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
65.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
65.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
65.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
65.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
65.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
64.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
64.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
64.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
63.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
62.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
62.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
61.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
60.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
60.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
60.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
60.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
59.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
58.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
57.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
57.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
56.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
56.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
55.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
54.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
53.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
53.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
53.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
53.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
52.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
52.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
52.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
51.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
50.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
50.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
50.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
50.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
50.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
49.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
49.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
49.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
48.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
48.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
47.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
47.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
46.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
46.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
45.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
44.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
44.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
42.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
40.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
40.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
39.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
39.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
38.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
38.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
37.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
35.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
35.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
35.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
34.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
33.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
33.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
32.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
31.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
30.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.