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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 11.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 6.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 302.7
Min RPKM: 0.9
Std RPKM: 49.5
Median RPKM: 40.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
302.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
293.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
262.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
238.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
172.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
160.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
159.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
155.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
152.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
148.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
139.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
138.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
136.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
130.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
130.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
129.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
127.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
120.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
120.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
119.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
117.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
117.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
117.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
115.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
113.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
108.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
108.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
107.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
107.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
107.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
105.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
105.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
105.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
101.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
97.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
97.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
96.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
96.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
94.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
92.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
90.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
88.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
88.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
87.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
86.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
85.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
83.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
81.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
81.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
78.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
76.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
75.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
75.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
74.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
71.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
71.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
70.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
68.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
67.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
67.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
66.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
66.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
66.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
65.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
65.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
64.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
63.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
63.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
62.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
61.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
60.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
60.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
60.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
59.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
59.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
59.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
59.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
58.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
58.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
56.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
56.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
56.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
55.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
55.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
53.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
52.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
51.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
51.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
51.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
50.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
50.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
50.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
49.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
49.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
48.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
47.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
47.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
46.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
45.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
44.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
44.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
44.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
42.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
42.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
41.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
41.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
40.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
40.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
40.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
40.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
39.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
38.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
37.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
37.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
37.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
36.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
36.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
35.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
35.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
35.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
33.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
33.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
32.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
31.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
31.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
31.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
30.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
30.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
30.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
30.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
30.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
29.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
29.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
28.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
28.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
28.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
28.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
27.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
26.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
26.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
25.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
25.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
25.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
25.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
24.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
24.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
23.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
23.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
23.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
22.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
22.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
22.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
22.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
22.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
21.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
21.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
21.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
21.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
20.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
20.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
19.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
19.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
19.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
19.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
19.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
18.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
18.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
18.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
18.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
17.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
16.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
16.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
16.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
15.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
15.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
15.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
14.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
14.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
14.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
13.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
13.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
13.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
13.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
13.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
13.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
11.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
11.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
11.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
10.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
10.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
8.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
8.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
7.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
7.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
7.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
7.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
7.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
6.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
6.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
6.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
6.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
6.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
5.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
5.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
4.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
4.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
3.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
3.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
2.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
2.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
2.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
2.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
2.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
0.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.