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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 245.1
Min RPKM: 5.5
Std RPKM: 54.7
Median RPKM: 73.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
245.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
237.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
225.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
215.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
201.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
199.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
194.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
182.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
180.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
169.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
150.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
144.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
139.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
138.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
132.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
131.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
130.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
128.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
128.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
128.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
128.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
125.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
125.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
124.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
123.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
121.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
119.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
119.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
113.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
113.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
113.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
112.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
111.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
111.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
107.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
106.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
104.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
101.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
99.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
98.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
97.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
94.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
93.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
93.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
91.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
90.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
88.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
87.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
86.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
86.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
80.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
78.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
77.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
77.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
76.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
74.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
74.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
73.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
73.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
72.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
72.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
71.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
70.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
67.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
67.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
64.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
63.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
62.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
61.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
60.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
59.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
57.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
57.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
56.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
56.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
55.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
54.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
53.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
52.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
48.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
46.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
46.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
43.4
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
42.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
42.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
37.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
36.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
35.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
35.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
34.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
32.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
31.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
29.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
25.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
25.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
24.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
23.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
22.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
22.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
22.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
20.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
18.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
18.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
17.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
16.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
16.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
15.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
13.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
12.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
10.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
10.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
10.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
9.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
8.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
7.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
6.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.