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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 404.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 513.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 269.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 314.6
Min RPKM: 36.8
Std RPKM: 42.9
Median RPKM: 92.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
314.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
299.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
285.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
220.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
217.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
198.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
197.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
194.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
192.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
190.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
180.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
180.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
176.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
173.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
169.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
164.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
164.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
162.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
157.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
154.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
152.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
151.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
148.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
147.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
146.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
145.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
144.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
142.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
142.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
141.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
140.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
136.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
135.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
134.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
132.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
131.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
131.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
129.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
128.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
127.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
127.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
126.6
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
125.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
125.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
124.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
122.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
122.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
121.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
121.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
121.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
120.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
119.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
118.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
118.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
117.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
115.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
113.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
113.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
113.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
113.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
111.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
111.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
111.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
110.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
110.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
109.8
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
109.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
109.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
108.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
108.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
107.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
106.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
106.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
106.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
106.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
106.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
105.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
104.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
104.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
102.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
102.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
100.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
100.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
100.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
100.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
99.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
99.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
99.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
98.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
98.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
97.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
97.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
97.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
97.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
96.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
96.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
95.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
95.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
95.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
95.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
94.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
93.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
93.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
92.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
92.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
92.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
92.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
92.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
91.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
91.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
90.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
90.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
90.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
90.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
90.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
89.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
89.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
88.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
87.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
87.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
86.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
86.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
85.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
85.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
85.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
85.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
85.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
85.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
84.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
84.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
83.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
83.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
83.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
82.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
82.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
82.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
82.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
81.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
81.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
81.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
80.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
80.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
80.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
80.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
80.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
79.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
79.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
79.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
79.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
79.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
78.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
78.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
78.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
77.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
76.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
76.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
76.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
75.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
74.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
73.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
73.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
72.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
72.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
72.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
71.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
71.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
70.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
69.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
69.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
68.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
68.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
68.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
68.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
68.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
67.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
66.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
66.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
65.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
65.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
65.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
64.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
63.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
63.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
62.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
62.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
61.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
61.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
60.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
58.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
57.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
57.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
56.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
56.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
55.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
55.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
55.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
55.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
55.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
54.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
53.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
53.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
51.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
51.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
49.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
48.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
48.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
46.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
46.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
45.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
45.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
43.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
42.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
38.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
36.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.