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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 190.9
Min RPKM: 44.3
Std RPKM: 24.1
Median RPKM: 90.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
190.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
151.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
146.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
145.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
144.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
139.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
136.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
132.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
130.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
127.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
126.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
124.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
122.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
122.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
122.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
121.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
120.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
115.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
115.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
115.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
111.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
111.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
111.2
GTEX-144GN-2126-SM-5O99D
50-59 years, male
108.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
103.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
101.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
99.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
99.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
99.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
98.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
98.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
97.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
97.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
97.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
97.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
97.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
97.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
97.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
96.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
96.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
95.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
95.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
94.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
93.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
93.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
92.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
92.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
92.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
91.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
91.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
91.4
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
91.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
89.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
89.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
88.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
88.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
87.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
87.6
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
87.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
87.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
87.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
85.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
84.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
84.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
83.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
83.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
82.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
82.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
81.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
80.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
79.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
78.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
78.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
78.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
78.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
78.2
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
77.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
76.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
74.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
74.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
74.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
73.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
73.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
73.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
71.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
71.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
70.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
70.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
69.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
68.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
68.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
67.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
67.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
67.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
66.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
66.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
64.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
64.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
63.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
61.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
60.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
59.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
55.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
44.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.