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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 46.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 17.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 10
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 101.7
Min RPKM: 17.7
Std RPKM: 15.2
Median RPKM: 54.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
101.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
96.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
95.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
95.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
93.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
88.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
87.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
87.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
86.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
85.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
84.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
84.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
83.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
82.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
82.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
81.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
81.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
80.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
79.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
79.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
79.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
78.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
77.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
77.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
77.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
76.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
76.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
75.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
74.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
74.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
74.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
74.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
74.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
73.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
73.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
73.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
71.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
71.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
71.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
70.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
69.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
69.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
68.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
68.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
68.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
68.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
66.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
66.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
66.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
66.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
64.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
64.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
64.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
63.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
63.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
63.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
63.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
63.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
63.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
63.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
62.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
62.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
62.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
62.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
61.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
61.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
61.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
61.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
61.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
60.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
60.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
60.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
59.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
59.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
59.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
59.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
59.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
59.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
59.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
59.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
59.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
58.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
58.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
58.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
58.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
58.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
58.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
57.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
57.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
57.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
57.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
56.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
56.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
56.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
56.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
56.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
56.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
56.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
55.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
55.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
55.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
55.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
55.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
55.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
55.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
55.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
54.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
54.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
54.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
54.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
54.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
54.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
54.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
54.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
53.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
53.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
53.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
53.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
53.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
52.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
52.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
52.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
52.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
51.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
51.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
51.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
50.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
50.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
50.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
50.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
50.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
49.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
49.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
49.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
49.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
49.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
48.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
48.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
48.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
48.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
48.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
48.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
48.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
48.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
48.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
48.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
48.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
47.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
47.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
47.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
47.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
47.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
47.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
47.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
46.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
46.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
46.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
46.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
46.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
46.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
45.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
45.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
45.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
45.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
44.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
44.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
43.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
43.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
43.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
42.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
42.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
42.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
42.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
41.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
41.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
41.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
41.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
41.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
40.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
40.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
40.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
40.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
40.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
40.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
40.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
39.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
39.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
39.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
39.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
39.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
39.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
39.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
39.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
38.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
38.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
38.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
38.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
38.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
38.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
38.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
37.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
37.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
37.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
34.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
33.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
32.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
32.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
31.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
31.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
29.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
28.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
28.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
27.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
17.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.