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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 436.7
Min RPKM: 86.5
Std RPKM: 54.0
Median RPKM: 209.3
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
436.7
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
322.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
318.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
286.2
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
274.7
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
267.5
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
264.7
GTEX-13O21-1926-SM-5MR39
50-59 years, male
262.4
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
257.7
GTEX-Y111-2626-SM-4TT24
50-59 years, male
255.8
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
255.3
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
252.3
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
251.2
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
248.1
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
243.5
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
240.2
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
240.2
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
238.0
GTEX-X261-2426-SM-4PQZU
50-59 years, male
237.7
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
235.5
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
235.2
GTEX-11P82-0926-SM-5986X
20-29 years, male
234.0
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
233.5
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
231.5
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
224.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
224.4
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
220.8
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
220.4
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
209.3
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
207.1
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
205.5
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
205.2
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
204.0
GTEX-1445S-2926-SM-5O993
60-69 years, male
202.4
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
200.2
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
198.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
197.8
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
194.5
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
189.1
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
189.0
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
189.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
187.7
GTEX-13113-1526-SM-5EGHV
60-69 years, female
187.4
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
184.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
180.1
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
179.4
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
179.2
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
178.5
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
176.4
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
166.6
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
149.1
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
149.0
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
148.8
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
148.3
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
146.1
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
110.7
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
86.5
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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